STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLLPMARVEL domain-containing protein. (215 aa)    
Predicted Functional Partners:
SMAX5B_015831
Putative tumor protein D52-like.
   
 
 0.526
ENSSMAP00000010021
Aldehyde dehydrogenase 4 family, member A1.
   
 
  0.492
ENSSMAP00000001555
annotation not available
   
  
 0.488
SMAX5B_012714
Chemokine-like factor isoform 2.
      
 0.459
SMAX5B_008486
Putative myelin and lymphocyte protein-like.
   
  
 0.434
SMAX5B_008568
Putative myelin and lymphocyte protein-like.
   
  
0.434
SMAX5B_009199
Putative myelin and lymphocyte protein-like.
   
  
 0.434
SMAX5B_003597
Glycolipid transfer protein.
    
 
 0.410
ENSSMAP00000022511
Glycolipid transfer protein a.
    
 
 0.410
ENSSMAP00000021198
Lysosomal-associated membrane protein 2.
      
 0.407
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.