STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000020698annotation not available (668 aa)    
Predicted Functional Partners:
SMAX5B_009917
Recombination activation protein 2.
   
 0.929
SMAX5B_008251
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.873
SMAX5B_015038
Putative ubiquitin-conjugating enzyme E2 variant 1-like isoform 2.
     
 0.848
SMAX5B_021594
Putative heme-binding protein 1-like isoform 2.
   
 0.833
ENSSMAP00000016923
Si:ch211-152c8.4.
    
 0.832
SMAX5B_022419
Phospholipase A2.
     
 0.818
SMAX5B_001676
60S ribosomal protein L21 isoform 10.
   
 
 0.804
SMAX5B_018326
Putative BRCA1-associated RING domain protein 1 isoform 2.
    
 0.771
SMAX5B_000260
Putative CAAX prenyl protease 1-like isoform 3.
   
 
 0.742
SMAX5B_022294
Putative BRISC and BRCA1-A complex member 1-like isoform 2.
    
 0.727
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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