STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_009625Putative fer3-like protein. (73 aa)    
Predicted Functional Partners:
SMAX5B_012595
Putative transcription factor 12.
    
 0.709
SMAX5B_006647
Putative transcription factor E2-alpha-like.
    
 0.709
SMAX5B_022501
Putative transcription factor E2-alpha-like isoform 3.
    
 0.709
SMAX5B_003040
Putative transcription factor 4-like.
    
 0.709
TCF4
Putative transcription factor 4-like.
    
 0.709
SMAX5B_009804
Putative transcription factor 12-like.
    
 0.707
SMAX5B_018067
LIM domain-binding protein 1.
    
 0.589
SMAX5B_002061
Putative LIM domain-binding protein 1 isoform 2.
    
 0.589
SMAX5B_019095
Isoform 3 of LIM domain-binding protein 2.
    
 0.589
ALX3
Putative homeobox protein aristaless-like 3.
   
 0.539
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.