STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_007222Putative SUN domain-containing protein 1-like. (845 aa)    
Predicted Functional Partners:
SMAX5B_009034
Putative nesprin-2-like.
    
 0.760
SMAX5B_000034
Putative nesprin-2-like.
    
 0.760
SMAX5B_010713
Uncharacterized protein.
    
 0.760
SMAX5B_019655
Putative nesprin-1-like.
    
 0.760
H2AZ1
Histone H2A; Belongs to the histone H2A family.
    
 
 0.697
ENSSMAP00000020353
H2A.Z variant histone 2a.
    
 
 0.697
SMAX5B_000959
Putative lamin-B2; Belongs to the intermediate filament family.
    
 0.663
ENSSMAP00000012506
Lamin B1.
    
 0.663
SMAX5B_016951
Putative centrin-3.
   
 
 0.663
SMAX5B_013544
Putative lamin; Belongs to the intermediate filament family.
    
 0.663
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.