STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_003204Putative teashirt-like 3. (1230 aa)    
Predicted Functional Partners:
SMAX5B_019949
Putative transcriptional coactivator YAP1.
     
 0.857
SMAX5B_021888
Homeobox protein Meis2.
   
 0.820
SMAX5B_008596
Myeloid ecotropic viral integration 1.
   
 0.820
SMAX5B_001255
Meis2.
   
 0.820
SMAX5B_013165
Putative iroquois-class homeodomain protein IRX-3.
   
 0.709
ENSSMAP00000006222
annotation not available
   
 0.674
SMAX5B_013210
Putative iroquois-class homeodomain protein IRX-5.
   
 0.674
ENSSMAP00000031197
annotation not available
   
 0.674
SMAX5B_001845
Homeobox protein Mohawk.
   
 0.646
SMAX5B_011719
Putative iroquois-class homeodomain protein irx-4-like.
   
 0.646
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.