STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_004352Putative RNA-binding protein 4B-like isoform 2. (342 aa)    
Predicted Functional Partners:
SMAX5B_013814
Putative heterogeneous nuclear ribonucleoprotein K-like.
   
 0.789
SMAX5B_016556
Putative heterogeneous nuclear ribonucleoprotein K-like.
   
 0.789
SMAX5B_014991
Putative heterogeneous nuclear ribonucleoprotein A1.
   
 0.688
SMAX5B_009446
Putative heterogeneous nuclear ribonucleoprotein A0-like.
   
 0.688
ENSSMAP00000016809
annotation not available
   
 0.688
SMAX5B_018171
Heterogeneous nuclear ribonucleoprotein A3 isoform 3.
   
 0.688
ENSSMAP00000034036
Interleukin enhancer binding factor 2.
   
 
 0.688
SMAX5B_008152
Runt-related transcription factor.
    
  0.668
SMAX5B_003435
Runt-related transcription factor.
    
  0.668
SMAX5B_022692
Runt-related transcription factor.
    
  0.668
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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