STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_021774Preprotein translocase SecA subunit-like protein. (462 aa)    
Predicted Functional Partners:
SMAX5B_006101
Parafibromin.
   
 0.855
SMAX5B_009190
RNA polymerase II-associated factor 1-like.
   
 0.847
SMAX5B_021780
Putative cyclin-dependent kinase 2-interacting protein isoform 2.
    
 0.804
SMAX5B_012306
Putative RNA polymerase-associated protein CTR9-like.
    
 0.804
SMAX5B_003050
Putative complement component C6.
   
 0.785
SMAX5B_008963
RNA polymerase-associated protein Rtf1-like isoform 2.
    
 0.731
SMAX5B_008528
Putative baculoviral IAP repeat-containing protein 6-like.
    
 0.713
SMAX5B_009275
Aurora kinase B; Belongs to the protein kinase superfamily.
    
 
 0.689
SMAX5B_005156
Serine/threonine-protein kinase 6; Belongs to the protein kinase superfamily.
    
 
 0.689
ENSSMAP00000018486
DAB adaptor protein 1b.
   
 0.666
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.