STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_008728DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1134 aa)    
Predicted Functional Partners:
SMAX5B_022458
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 0.999
SMAX5B_006679
DNA-directed RNA polymerase II polypeptide F isoform 2.
  
 0.999
ENSSMAP00000011667
Polymerase (RNA) II (DNA directed) polypeptide K.
   
 0.999
SMAX5B_007375
Putative DNA-directed RNA polymerase I subunit RPA49.
   
 0.999
SMAX5B_019147
Putative DNA-directed RNA polymerases I and III subunit RPAC2-like.
  
 0.999
SMAX5B_009616
Putative DNA-directed RNA polymerase I subunit RPA43.
   
 0.999
POLR2E
Polymerase (RNA) II (DNA directed) polypeptide E isoform 2.
  
 0.999
SMAX5B_019190
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 0.999
SMAX5B_004408
Putative RNA polymerase I-specific transcription initiation factor RRN3.
   
 0.999
SMAX5B_008739
DNA-directed RNA polymerases I and III subunit RPAC1.
  
 0.999
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.