STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000022647Kelch-like family member 40a. (613 aa)    
Predicted Functional Partners:
SMAX5B_005270
Uncharacterized protein.
   
 0.928
SMAX5B_007217
Putative Bardet-Biedl syndrome 1 protein.
    
 0.927
SMAX5B_005641
Putative Bardet-Biedl syndrome 4 protein.
    
 0.923
SMAX5B_019013
Putative Bardet-Biedl syndrome 7 protein-like.
   
 0.915
SMAX5B_000262
TPR_REGION domain-containing protein.
   
 0.914
SMAX5B_017796
Bardet-Biedl syndrome 2 protein homolog.
    
 0.910
ENSSMAP00000027895
Leucine zipper transcription factor-like 1.
   
 0.798
ENSSMAP00000009215
Kelch-like family member 31.
  
 
0.720
ENSSMAP00000022290
Kelch-like family member 13.
  
0.710
SMAX5B_009669
Putative nuclear factor erythroid 2-related factor 1-like.
   
 0.700
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.