STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_022044Putative splicing factor U2AF 35 kDa subunit-like. (228 aa)    
Predicted Functional Partners:
SMAX5B_011831
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.989
SMAX5B_016015
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.989
ENSSMAP00000009497
Serine and arginine rich splicing factor 2a.
   
 0.883
ENSSMAP00000024086
annotation not available
   
 0.883
SMAX5B_004570
Putative serine/arginine-rich splicing factor 1-like isoform 2.
   
 0.881
ENSSMAP00000015825
Serine and arginine rich splicing factor 1b.
   
 0.881
SMAX5B_003513
Putative serine/arginine-rich splicing factor 9-like isoform 2.
   
 0.876
SRSF3
Putative serine/arginine-rich splicing factor 3 isoform 2.
   
 0.842
ENSSMAP00000034034
Serine and arginine rich splicing factor 3a.
   
 0.842
SMAX5B_013018
Putative U1 small nuclear ribonucleoprotein 70 kDa.
   
 0.829
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.