STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_013019Putative splicing factor arginine/serine-rich 19. (1381 aa)    
Predicted Functional Partners:
SMAX5B_020280
DUF4211 domain containing protein.
   
  
 0.543
ENSSMAP00000025122
Si:ch73-105b23.6.
  
 
   0.513
INSC
INSC_LBD domain-containing protein.
   
  
 0.510
SMAX5B_011204
Putative mediator of RNA polymerase II transcription subunit 25.
   
  
 0.497
SMAX5B_019405
Putative SH3 and PX domain-containing protein 2B.
      
 0.495
SMAX5B_010754
Troponin I fast skeletal muscle.
      
 0.491
SMAX5B_021139
Uncharacterized protein.
  
     0.491
SMAX5B_011831
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.472
SMAX5B_016015
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.472
SMAX5B_001404
Putative transmembrane gamma-carboxyglutamic acid protein 2-like.
      
 0.446
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.