STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_016026Putative isoleucine--tRNA ligase mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (1132 aa)    
Predicted Functional Partners:
SMAX5B_013122
Bifunctional glutamate/proline--tRNA ligase.
 
 0.999
SMAX5B_022244
Putative proline--tRNA ligase mitochondrial.
   
 0.991
SMAX5B_012091
Putative valine--tRNA ligase-like isoform 4.
  
0.987
SMAX5B_005162
Putative methionine--tRNA ligase cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.984
SMAX5B_006947
Tyrosine--tRNA ligase.
  
 0.981
SMAX5B_012511
Lysine--tRNA ligase.
  
 0.980
SMAX5B_011713
Putative leucine--tRNA ligase mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.973
SMAX5B_019404
Leucyl-tRNA synthetase cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.973
SMAX5B_000192
Putative arginine--tRNA ligase mitochondrial isoform 3; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.971
SMAX5B_001422
Putative arginine--tRNA ligase cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.971
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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