STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_001740Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family. (372 aa)    
Predicted Functional Partners:
SMAX5B_006033
Putative WD repeat-containing protein 48.
   
 0.970
SMAX5B_021973
Putative WD repeat-containing protein 20.
   
 0.913
SMAX5B_019836
Putative WD repeat-containing protein 20-like.
   
 0.913
SMAX5B_008216
Putative WD repeat-containing protein 20-like.
   
 0.908
ENSSMAP00000008002
Ribosomal protein S27a.
    
  0.885
ENSSMAP00000034351
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.826
SMAX5B_002376
Putative Fanconi anemia group D2 protein.
    
 0.824
SMAX5B_009916
Putative Fanconi anemia group I protein isoform 2.
   
 0.813
ENSSMAP00000014631
annotation not available
    
 0.786
SMAX5B_010392
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.781
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.