STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_020898Putative transducin beta-like protein 3. (974 aa)    
Predicted Functional Partners:
WDR12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.999
SMAX5B_006593
Putative ribosomal RNA-processing protein 7-like A.
   
 0.999
ENSSMAP00000011592
UTP15 small subunit processome component.
  
0.999
SMAX5B_001114
Putative WD repeat-containing protein 3.
   
0.999
SMAX5B_011022
Nucleolar protein 6.
   
 0.999
SMAX5B_006871
Putative WD repeat-containing protein 36 isoform 2.
   
 0.999
SMAX5B_006955
Putative periodic tryptophan protein 2-like.
  
0.999
ENSSMAP00000019335
Fibrillarin.
   
 
 0.999
SMAX5B_014812
Putative WD repeat-containing protein 46 isoform 2.
   
 
 0.999
ENSSMAP00000020596
IMP U3 small nucleolar ribonucleoprotein 4.
   
 
 0.999
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.