STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_016057Putative tetratricopeptide repeat protein 30A-like. (648 aa)    
Predicted Functional Partners:
SMAX5B_007327
Putative tetratricopeptide repeat protein 26; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
 
 0.994
SMAX5B_021820
Putative intraflagellar transport protein 52-like.
    
 0.994
SMAX5B_001119
Intraflagellar transport protein 88-like.
    
 0.993
SMAX5B_013452
Putative intraflagellar transport protein 80-like.
    
 0.993
SMAX5B_001241
Putative intraflagellar transport protein 81-like.
    
 0.991
SMAX5B_000087
Putative intraflagellar transport protein 172-like.
   
 0.990
SMAX5B_022545
Putative clusterin-associated protein 1.
   
 0.989
SMAX5B_018478
Putative TRAF3-interacting protein 1.
    
 0.988
SMAX5B_001626
Putative intraflagellar transport protein 74-like.
    
 0.987
SMAX5B_004437
Putative intraflagellar transport protein 46-like.
    
 0.985
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.