STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_021559Putative DNA repair protein RAD51-like 4. (341 aa)    
Predicted Functional Partners:
SMAX5B_000328
Putative Fanconi anemia group M protein.
   
 0.998
SMAX5B_004580
Putative breast cancer type 2 susceptibility protein-like.
   
 0.992
ENSSMAP00000018147
annotation not available
   
 0.990
SMAX5B_014844
Putative DNA repair protein RAD51-like 3.
   
 0.979
ENSSMAP00000001780
BLM RecQ like helicase.
  
 0.970
SMAX5B_007075
Putative crossover junction endonuclease MUS81.
   
 0.966
ENSSMAP00000008138
RecQ helicase-like 4.
  
 0.965
SMAX5B_010091
Putative DNA repair protein RAD52-like.
    
 0.962
SMAX5B_010392
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.961
ENSSMAP00000027541
Exonuclease 1.
  
 0.961
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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