STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_0013854-aminobutyrate aminotransferase mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (500 aa)    
Predicted Functional Partners:
SMAX5B_008093
Putative succinate-semialdehyde dehydrogenase mitochondrial-like.
  
 0.968
SMAX5B_008726
Putative sphingosine-1-phosphate lyase 1.
  
 0.960
SMAX5B_013905
Putative alanine--glyoxylate aminotransferase 2 mitochondrial-like; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
0.925
SMAX5B_007953
Putative aldehyde dehydrogenase family 9 member A1; Belongs to the aldehyde dehydrogenase family.
  
 0.923
SMAX5B_005771
Putative aldehyde dehydrogenase family 9 member A1-B-like; Belongs to the aldehyde dehydrogenase family.
  
 0.923
SMAX5B_013717
Aldehyde dehydrogenase mitochondrial; Belongs to the aldehyde dehydrogenase family.
  
 0.923
SMAX5B_016472
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.923
SMAX5B_007037
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.923
SMAX5B_006491
Putative aldehyde dehydrogenase family 16 member A1 isoform 2.
  
 0.923
SMAX5B_012454
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.923
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.