STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_002925Putative nucleoporin-like protein 2. (463 aa)    
Predicted Functional Partners:
SMAX5B_016381
Putative aladin.
    
 0.905
SMAX5B_009444
Putative nuclear RNA export factor 1.
    
 0.895
SMAX5B_013890
Putative nuclear pore complex protein Nup214.
   
 0.885
SMAX5B_008251
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.881
SMAX5B_014173
mRNA export factor isoform 3.
    
 0.867
ENSSMAP00000029020
annotation not available
    
 0.866
SMAX5B_008601
Exportin-1.
     
 0.854
SMAX5B_006900
Exportin-1.
     
 0.854
SMAX5B_019939
Putative nuclear pore complex protein Nup88.
     
 0.852
ENSSMAP00000025573
Nucleoporin 35.
    
 0.841
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.