STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_007633Putative homeobox protein goosecoid-like. (239 aa)    
Predicted Functional Partners:
SMAX5B_022162
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
    
   0.965
SMAX5B_011590
Putative zinc finger protein 330 isoform 2.
    
   0.965
ENSSMAP00000010685
ISY1 splicing factor homolog.
    
   0.965
SMAX5B_001969
Putative lisH domain-containing protein FOPNL.
    
   0.965
SMAX5B_010245
MOB-like protein phocein.
    
   0.965
ENSSMAP00000023857
Proteasome activator subunit 3 interacting protein 1.
    
   0.965
SMAX5B_005265
Putative RRP15-like protein.
    
   0.965
SMAX5B_015638
Putative tektin-2.
    
   0.965
SMAX5B_018110
T-box transcription factor TBX20.
    
 
 0.914
SMAX5B_004565
MBD2-interacting zinc finger protein.
    
   0.897
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.