STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL8Oxysterol-binding protein; Belongs to the OSBP family. (884 aa)    
Predicted Functional Partners:
NPC1L1
Putative Niemann-Pick C1-like protein 1.
   
 0.827
SMAX5B_006425
Putative Niemann-Pick C1 protein.
   
 0.827
SMAX5B_003427
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.664
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.649
SMAX5B_018568
UDP-glucuronic acid decarboxylase 1.
     
 0.637
SMAX5B_005255
Putative sterol regulatory element-binding protein cleavage-activating protein-like.
   
 0.599
SMAX5B_018292
Golgi pH regulator.
 
      0.559
SMAX5B_007560
Putative rho-related GTP-binding protein RhoH.
    
  0.551
SMAX5B_008499
Ras-like family member Q.
    
  0.551
SMAX5B_004819
Putative receptor-interacting serine/threonine-protein kinase 4.
    
 0.539
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.