STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_008601Exportin-1. (1071 aa)    
Predicted Functional Partners:
SMAX5B_013890
Putative nuclear pore complex protein Nup214.
    
 0.989
SMAX5B_002465
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.981
SMAX5B_018885
Putative nuclear pore complex protein Nup98-Nup96.
    
 0.978
SMAX5B_010956
Putative G-protein coupled receptor 133; Belongs to the G-protein coupled receptor 2 family.
   
 0.972
SMAX5B_018361
Putative E3 SUMO-protein ligase RanBP2.
   
 
 0.948
ENSSMAP00000032057
RAN binding protein 1.
   
 
 0.945
SMAX5B_005114
Snurportin-1.
    
 
 0.941
SMAX5B_019939
Putative nuclear pore complex protein Nup88.
    
 0.932
SMAX5B_002925
Putative nucleoporin-like protein 2.
     
 0.854
SMAX5B_013309
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
    
 
 0.837
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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