STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_020787Putative nuclear GTPase SLIP-GC-like. (819 aa)    
Predicted Functional Partners:
SMAX5B_017995
Putative glutamate--cysteine ligase catalytic subunit.
   
 0.855
SMAX5B_012441
Putative sorbitol dehydrogenase.
  
 0.744
SMAX5B_006523
Aldo_ket_red domain-containing protein.
  
 0.699
ENSSMAP00000005025
annotation not available
  
 0.699
SMAX5B_008000
Putative voltage-gated potassium channel subunit beta-3.
  
 0.699
KCNAB3
Putative voltage-gated potassium channel subunit beta-3-like.
  
 0.699
ENSSMAP00000023631
Aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase).
  
 0.699
SMAX5B_000521
Putative voltage-gated potassium channel subunit beta-2.
  
 0.699
KCNAB1
Putative voltage-gated potassium channel subunit beta-1-like.
  
 0.699
GLO1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
  
 0.693
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.