STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_006922Putative histone RNA hairpin-binding protein-like isoform 2. (306 aa)    
Predicted Functional Partners:
SMAX5B_020830
Putative MIF4G domain-containing protein.
    
 
 0.951
SMAX5B_010673
Putative 3'-5' exoribonuclease 1.
   
 
 0.909
SMAX5B_013864
Putative CBP80/20-dependent translation initiation factor-like.
    
 
 0.870
NCBP1
Nuclear cap-binding protein subunit 1.
   
 0.831
SMAX5B_015694
Putative U7 snRNA-associated Sm-like protein LSm10.
   
 
 0.811
SMAX5B_019184
Putative U7 snRNA-associated Sm-like protein LSm11.
     
 0.802
ENSSMAP00000014281
Small nuclear ribonucleoprotein D1 polypeptide.
   
 
 0.777
SMAX5B_010392
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
    0.773
SMAX5B_011344
Putative ERI1 exoribonuclease 2.
   
 
 0.750
MCM7
DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]
   
  
 0.724
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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