STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASSF1Putative ras association domain-containing protein 1. (366 aa)    
Predicted Functional Partners:
ENSSMAP00000009562
Ras association domain family member 5.
    
0.951
SMAX5B_015908
Serine/threonine-protein kinase 3.
    
 0.925
SMAX5B_016433
Serine/threonine-protein kinase 4.
    
 0.925
SMAX5B_018589
Ras-related protein m-ras.
    
 0.869
SMAX5B_001396
Uncharacterized protein.
    
 0.809
ENSSMAP00000035027
RAS related 2.
    
 0.809
SMAX5B_019272
Putative E3 ubiquitin-protein ligase Mdm2; Belongs to the MDM2/MDM4 family.
   
 0.769
SMAX5B_009063
Uncharacterized protein.
    
 
 0.754
SMAX5B_015688
Putative death domain-associated protein 6.
    
 
 0.752
CSDE1
Putative cold shock domain-containing protein E1 isoform 3.
    
 0.744
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.