STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_004096Transcription initiation factor TFIID subunit. (395 aa)    
Predicted Functional Partners:
SMAX5B_011624
Putative transcription initiation factor TFIID subunit 13 isoform 2.
    
 0.999
SMAX5B_012370
Putative TATA-box-binding protein-like.
    
 0.999
SMAX5B_016372
Putative transcription initiation factor TFIID subunit 11 isoform 2.
    
 0.999
SMAX5B_012103
Transcription initiation factor TFIID subunit 12 isoform 2.
    
 0.999
ENSSMAP00000014648
TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.
    
 0.999
SMAX5B_003272
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.999
SMAX5B_013710
Putative transcription initiation factor TFIID subunit 2.
   
 0.999
SMAX5B_009293
Transcription initiation factor TFIID subunit 7.
    
 0.999
SMAX5B_004292
Putative transcription initiation factor TFIID subunit 6-like isoform 2.
    
 0.999
SMAX5B_014966
Putative transcription initiation factor TFIID subunit 8.
    
 0.997
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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