STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_010117Retinoid-related orphan receptor alpha 2. (519 aa)    
Predicted Functional Partners:
SMAX5B_010863
Putative nuclear receptor ROR-beta-like.
  
 
0.863
SMAX5B_003997
Putative nuclear receptor corepressor 1 isoform 2.
    
 0.846
SMAX5B_010904
Putative nuclear receptor corepressor 2.
    
 0.846
SMAX5B_004857
Putative nuclear receptor-interacting protein 1.
    
 0.843
SMAX5B_006291
Putative histone acetyltransferase p300-like isoform 2.
    
 0.696
SMAX5B_020257
Putative histone acetyltransferase p300-like.
    
 0.696
ENSSMAP00000018886
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
    
 0.662
SMAX5B_005794
Putative crystallin J1A-like isoform 3.
    
 0.643
ENSSMAP00000033133
annotation not available
    
 0.643
SMAX5B_012007
Putative acyl-coenzyme A thioesterase THEM4-like.
     
 0.630
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.