STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_017621Putative vacuolar protein sorting-associated protein 4B-like; Belongs to the AAA ATPase family. (437 aa)    
Predicted Functional Partners:
SMAX5B_008107
Putative vacuolar protein sorting-associated protein VTA1-like.
   
 0.984
SMAX5B_020586
Charged multivesicular body protein 2a.
    
 0.982
ENSSMAP00000034949
IST1 factor associated with ESCRT-III.
   
 0.965
SMAX5B_018430
Putative charged multivesicular body protein 2b.
   
 0.962
SMAX5B_001804
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.962
ENSSMAP00000000775
Charged multivesicular body protein 1A.
   
 0.960
SMAX5B_000293
Putative charged multivesicular body protein 3.
   
 0.958
SMAX5B_021066
Putative charged multivesicular body protein 6-like isoform 2.
    
 0.948
SMAX5B_020610
Putative charged multivesicular body protein 6-like.
    
 0.948
ENSSMAP00000019102
annotation not available
   
 0.941
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.