STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_008672Putative ventral anterior homeobox 1. (315 aa)    
Predicted Functional Partners:
SRF
MADS-box domain-containing protein.
    
 0.656
SRF-2
Serum response factor protein.
    
 0.656
SMAX5B_018067
LIM domain-binding protein 1.
    
 0.573
SMAX5B_002061
Putative LIM domain-binding protein 1 isoform 2.
    
 0.573
SMAX5B_019095
Isoform 3 of LIM domain-binding protein 2.
    
 0.573
SMAX5B_001728
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
    
  0.537
PAX2
Paired box 2.
    
 
 0.533
LHX3
Putative LIM/homeobox protein Lhx3.
   
 0.523
SMAX5B_022612
LIM/homeobox protein Lhx4.
   
 0.523
SMAX5B_013138
Complexin 3a.
     
 0.496
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.