STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_016764Putative UPF0449 protein C19orf25-like. (99 aa)    
Predicted Functional Partners:
SMAX5B_000851
Putative RAD50-interacting protein 1.
    
 
 0.727
SMAX5B_017681
Putative sec1 family domain-containing protein 2; Belongs to the STXBP/unc-18/SEC1 family.
    
   0.604
SMAX5B_022581
Putative vesicle transport protein USE1 isoform 2.
    
   0.501
SMAX5B_017611
Putative carbonyl reductase family member 4.
    
 
 0.493
ENSSMAP00000013446
Zw10 kinetochore protein.
    
 
 0.464
SMAX5B_020752
Putative brain-specific angiogenesis inhibitor 1-associated protein 2.
    
   0.422
SMAX5B_020616
Putative brain-specific angiogenesis inhibitor 1-associated protein 2-like.
    
   0.422
SMAX5B_006260
Putative vesicle-trafficking protein SEC22b-like; Belongs to the synaptobrevin family.
    
   0.414
SMAX5B_022251
Putative vesicle-trafficking protein SEC22b-like; Belongs to the synaptobrevin family.
    
   0.414
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.