STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000027864annotation not available (298 aa)    
Predicted Functional Partners:
SRF
MADS-box domain-containing protein.
    
 0.656
SRF-2
Serum response factor protein.
    
 0.656
SMAX5B_018067
LIM domain-binding protein 1.
    
 0.641
SMAX5B_002061
Putative LIM domain-binding protein 1 isoform 2.
    
 0.641
SMAX5B_019095
Isoform 3 of LIM domain-binding protein 2.
    
 0.641
SMAX5B_018807
Factor in the germline alpha.
   
 0.632
GATA2
Putative endothelial transcription factor GATA-2.
   
 0.543
SMAX5B_010563
Putative trans-acting T-cell-specific transcription factor GATA-3.
   
 0.543
SMAX5B_014283
GATA-binding protein 2a.
   
 0.543
LHX3
Putative LIM/homeobox protein Lhx3.
   
0.541
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.