STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_004311Transgelin; Belongs to the calponin family. (240 aa)    
Predicted Functional Partners:
ENSSMAP00000021368
annotation not available
    
 
 0.846
ENSSMAP00000021384
annotation not available
    
 
 0.846
SMAX5B_020202
Putative WD repeat-containing protein 90; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.846
SMAX5B_000277
Putative parkin coregulated protein.
    
 
 0.756
SMAX5B_018137
Putative EF-hand domain-containing family member B.
   
   0.723
SMAX5B_004761
Putative EF-hand domain-containing family member C2.
    
 
 0.686
SMAX5B_019589
Putative EF-hand domain-containing protein 1.
    
 
 0.686
ENSSMAP00000000355
annotation not available
   
 0.685
SMAX5B_012490
Actin alpha cardiac isoform 2.
   
 0.685
SMAX5B_000163
Actin alpha cardiac.
   
 0.685
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.