STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_004282Putative bromodomain and WD repeat-containing protein 3. (1796 aa)    
Predicted Functional Partners:
SMAX5B_017597
Putative histone H2A deubiquitinase MYSM1.
   
 0.869
SMAX5B_020023
Spindle assembly checkpoint protein Mad2 isoform 3.
   
 0.823
SMAX5B_018506
TPR_REGION domain-containing protein.
   
 0.809
SMAX5B_017663
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
    
 0.803
SMAX5B_016344
Putative cleavage and polyadenylation specificity factor subunit 1-like.
   
 0.803
SMAX5B_004096
Transcription initiation factor TFIID subunit.
   
 0.794
SMAX5B_013710
Putative transcription initiation factor TFIID subunit 2.
   
 0.780
SMAX5B_012103
Transcription initiation factor TFIID subunit 12 isoform 2.
   
 0.779
SMAX5B_003272
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.777
SMAX5B_020312
Putative intraflagellar transport protein 140-like.
    
 0.768
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.