STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_015243Putative far upstream element-binding protein 3-like. (556 aa)    
Predicted Functional Partners:
PUF60
poly(U) binding splicing factor 60.
   
 
 0.777
SMAX5B_011370
Putative poly(A)-specific ribonuclease PARN.
   
 0.674
SMAX5B_017394
KH domain-containing protein.
   
 
 0.644
SMAX5B_000323
KH domain-containing protein.
   
 
 0.644
ENSSMAP00000005079
Exosome component 2.
   
  0.633
SMAX5B_002957
Putative m7GpppN-mRNA hydrolase isoform 3.
     
 0.564
SMAX5B_019872
Putative exosome complex component RRP46.
     
 0.559
SMAX5B_005803
Exosome complex exonuclease RRP41.
   
 
  0.554
SMAX5B_015877
Exosome complex exonuclease RRP42.
   
 
  0.548
SMAX5B_003963
Putative exosome complex component MTR3.
   
 
  0.542
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.