STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_015435Putative keratin type I cytoskeletal 9-like isoform 6. (156 aa)    
Predicted Functional Partners:
SMAX5B_018911
Transcription elongation factor SPT5.
   
 0.919
SMAX5B_006679
DNA-directed RNA polymerase II polypeptide F isoform 2.
    
 0.913
ENSSMAP00000011667
Polymerase (RNA) II (DNA directed) polypeptide K.
    
 0.913
POLR2E
Polymerase (RNA) II (DNA directed) polypeptide E isoform 2.
    
 0.913
SMAX5B_022458
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
 0.912
ENSSMAP00000001934
Polymerase (RNA) II (DNA directed) polypeptide G-like.
   
 0.912
SMAX5B_001282
DNA-directed RNA polymerase II subunit RPB3 isoform 2.
    
 0.912
ENSSMAP00000005408
Polymerase (RNA) II (DNA directed) polypeptide I.
    
 0.912
SMAX5B_017158
DNA-directed RNA polymerase II subunit RPB4.
    
 0.912
SMAX5B_005568
RNA_pol_L_2 domain-containing protein.
    
 0.912
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.