STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_020729Putative BTB/POZ domain-containing protein 17-like. (484 aa)    
Predicted Functional Partners:
SMAX5B_005888
Putative UBX domain-containing protein 7.
    
  0.664
SMAX5B_002710
Putative E3 ubiquitin-protein ligase MIB2.
    
 0.651
SMAX5B_005270
Uncharacterized protein.
    
 0.643
SMAX5B_019013
Putative Bardet-Biedl syndrome 7 protein-like.
    
 0.619
SMAX5B_000053
Putative tetratricopeptide repeat protein 13.
    
 0.605
SMAX5B_000262
TPR_REGION domain-containing protein.
    
 0.604
SMAX5B_020525
Putative next to BRCA1 1 protein.
    
 0.579
SMAX5B_004399
Putative next to BRCA1 1 protein.
    
 0.579
SMAX5B_011056
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.562
CUL3
Cullin-3; Belongs to the cullin family.
    
 0.548
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.