STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A1Putative zinc transporter ZIP1. (342 aa)    
Predicted Functional Partners:
SMAX5B_005479
Putative sorting and assembly machinery component 50-like B-like isoform 2.
    
 
 0.737
SMAX5B_018857
Sorting and assembly machinery component 50-like A isoform 2.
    
 
 0.737
SMAX5B_011065
Metaxin.
    
 
 0.729
SMAX5B_021729
Metaxin.
    
 
 0.729
SMAX5B_011734
Casein kinase 2 alpha 1 isoform 2; Belongs to the protein kinase superfamily.
    
 0.721
SMAX5B_003813
Putative casein kinase II subunit alpha'-like isoform 2.
    
 0.721
SMAX5B_015039
Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.
    
 0.721
CSNK2A2
Putative casein kinase II subunit alpha'-like; Belongs to the protein kinase superfamily.
    
 0.721
SMAX5B_003650
Putative interferon-inducible GTPase 5-like.
   
 0.640
SMAX5B_000665
Putative serine/threonine-protein kinase SIK3.
    
 0.638
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.