STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_006193Putative GREB1-like protein. (1947 aa)    
Predicted Functional Partners:
SMAX5B_006291
Putative histone acetyltransferase p300-like isoform 2.
    
  0.658
SMAX5B_020257
Putative histone acetyltransferase p300-like.
    
  0.658
SMAX5B_007434
Putative CREB-binding protein-like.
    
  0.649
SMAX5B_020700
Putative CREB-binding protein-like.
    
  0.649
SMAX5B_000183
ERbeta N multi-domain protein.
    
 0.624
SMAX5B_009141
Zf-C4 multi-domain protein.
    
 0.624
SMAX5B_019561
DUF89 multi-domain protein.
    
 0.624
SMAX5B_002811
Putative centromere protein P-like isoform 2.
    
  0.582
pgr
Putative progesterone receptor.
   
 0.497
SMAX5B_018628
Putative SH3 domain-containing RING finger protein 3-like.
      
 0.475
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.