STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1cbSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (327 aa)    
Predicted Functional Partners:
CPSF3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.952
SMAX5B_000047
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.950
SMAX5B_016344
Putative cleavage and polyadenylation specificity factor subunit 1-like.
    
 0.950
SMAX5B_002365
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 0.945
SMAX5B_000200
Eukaryotic translation initiation factor 2 subunit 1.
   
 0.944
SMAX5B_001661
Protein phosphatase 1 regulatory subunit.
  
 0.937
SMAX5B_006601
Putative cleavage and polyadenylation specificity factor subunit 4 isoform 2.
    
 0.936
SMAX5B_010662
Protein phosphatase 1 regulatory subunit.
  
 0.935
ENSSMAP00000014049
annotation not available
  
 0.934
SMAX5B_007466
Putative pre-mRNA 3'-end-processing factor FIP1.
   
 0.934
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.