STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_001784Putative sperm-associated antigen 6. (483 aa)    
Predicted Functional Partners:
SMAX5B_002300
Exportin-2.
   
 0.889
SMAX5B_015646
Putative nuclear pore complex protein Nup153.
   
 
 0.758
NCBP1
Nuclear cap-binding protein subunit 1.
   
 
 0.756
SMAX5B_022324
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 
 0.727
SMAX5B_000633
Putative coiled-coil domain-containing protein 19 mitochondrial.
   
 
 0.721
SMAX5B_018361
Putative E3 SUMO-protein ligase RanBP2.
   
 
 0.719
SMAX5B_019880
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.710
SMAX5B_014891
Putative exosome component 10 isoform 2.
    
   0.710
SMAX5B_007383
Putative nuclear pore complex protein Nup50.
   
 
 0.693
ENSSMAP00000025942
Coiled-coil domain containing 28A.
   
   0.682
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.