STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_013416Putative tristetraprolin-like. (429 aa)    
Predicted Functional Partners:
SMAX5B_012393
Putative exosome complex component RRP43.
   
  0.873
SMAX5B_021731
5'-3' exoribonuclease 1.
    
 0.824
SMAX5B_014323
Putative MAP kinase-activated protein kinase 2; Belongs to the protein kinase superfamily.
    
 0.784
SMAX5B_002957
Putative m7GpppN-mRNA hydrolase isoform 3.
   
 0.782
SMAX5B_017807
Putative CCR4-NOT transcription complex subunit 1-like.
    
 
 0.736
SMAX5B_003253
Putative mRNA-decapping enzyme 1A.
    
 0.733
SMAX5B_007738
mRNA_decap_C domain-containing protein.
    
 0.707
MAPKAPK3
Putative MAP kinase-activated protein kinase 2-like; Belongs to the protein kinase superfamily.
    
 0.701
SMAX5B_014339
MAP kinase-activated protein kinase 3 isoform 2; Belongs to the protein kinase superfamily.
    
 0.701
SMAX5B_003963
Putative exosome complex component MTR3.
    
  0.696
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.