STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL27APutative 60S ribosomal protein L27a-like; Belongs to the universal ribosomal protein uL15 family. (196 aa)    
Predicted Functional Partners:
SMAX5B_021258
Putative 60S ribosomal protein L35.
  
 0.999
RPS20
40S ribosomal protein S20 isoform 2.
  
 
 0.999
ENSSMAP00000003065
Ribosomal protein S26.
   
 
 0.999
ENSSMAP00000003082
Ribosomal protein L10.
  
 0.999
SMAX5B_007105
Putative 40S ribosomal protein S4-like isoform 2.
  
 
 0.999
SLC25A38
Mitochondrial glycine transporter; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the miochondrial matrix. Required during erythropoiesis. Belongs to the universal ribosomal protein uS2 family.
  
 
 0.999
SMAX5B_002795
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.999
ENSSMAP00000005842
Receptor for activated C kinase 1.
   
 
 0.999
SMAX5B_000686
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.999
RPS3A
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.999
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.