STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_012104Putative DNA repair and recombination protein RAD54B-like. (945 aa)    
Predicted Functional Partners:
SMAX5B_022127
DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]
  
 
 0.966
SMAX5B_021559
Putative DNA repair protein RAD51-like 4.
  
 
 0.919
SMAX5B_000328
Putative Fanconi anemia group M protein.
  
 0.900
SMAX5B_020062
RecA-like Dmc1 isoform 2; Belongs to the RecA family.
  
 
 0.898
SMAX5B_021436
Putative F-box only protein 18.
   
 
 0.894
ENSSMAP00000003664
annotation not available
  
0.893
SMAX5B_010294
Putative DNA excision repair protein ERCC-6-like 2.
  
0.893
SMAX5B_020949
Protein VAC14-like.
 
  
   0.889
SMAX5B_007075
Putative crossover junction endonuclease MUS81.
  
 0.874
SMAX5B_021975
Putative helicase-like transcription factor.
  
0.869
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.