STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_004299Putative roundabout-like 1-like. (1617 aa)    
Predicted Functional Partners:
SMAX5B_009421
Putative slit-like 3 protein-like.
   
 0.873
SMAX5B_017974
Putative slit-like 1 protein.
   
 0.849
SMAX5B_007562
Putative slit-like 2 protein-like.
   
 0.849
SMAX5B_003094
Putative slit-like 1 protein-like.
   
 0.849
ENSSMAP00000025659
Nyctalopin.
   
 0.821
ENSSMAP00000000790
Leucine-rich repeats and transmembrane domains 2a.
   
 0.724
SMAX5B_018210
Putative leucine-rich repeat-containing protein 3-like.
   
 0.724
ENSSMAP00000013858
annotation not available
   
 0.724
ENSSMAP00000016082
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
0.724
SMAX5B_020427
Putative leucine-rich repeat-containing protein 3B-like.
   
 0.724
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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