STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011814Putative RNA-binding protein 12-like. (497 aa)    
Predicted Functional Partners:
ENSSMAP00000000279
annotation not available
    
  0.556
SMAX5B_005888
Putative UBX domain-containing protein 7.
    
  0.556
SMAX5B_000722
Putative SID1 transmembrane family member 2.
    
  0.556
SMAX5B_007973
Putative rootletin-like.
    
  0.556
SMAX5B_005937
Putative trinucleotide repeat-containing 6A protein.
    
  0.556
SMAX5B_001457
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.556
SMAX5B_020852
Putative trinucleotide repeat-containing 6C protein-like.
    
  0.556
SMAX5B_007391
Putative trinucleotide repeat-containing 6C protein-like.
    
  0.556
SMAX5B_015435
Putative keratin type I cytoskeletal 9-like isoform 6.
    
  0.556
ENSSMAP00000029580
annotation not available
    
  0.556
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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