STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSNK1DCasein kinase I isoform 2; Belongs to the protein kinase superfamily. (443 aa)    
Predicted Functional Partners:
ENSSMAP00000034134
LTV1 ribosome biogenesis factor.
    
 0.958
ENSSMAP00000000570
Bystin-like.
    
 0.917
SMAX5B_011001
Putative serine/threonine-protein kinase RIO2.
    
 0.910
SMAX5B_000885
Casein kinase I; Belongs to the protein kinase superfamily.
  
0.893
SMAX5B_017122
Putative pre-rRNA-processing protein TSR1-like.
    
 0.884
SMAX5B_004727
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 0.874
SMAX5B_006503
Putative period circadian protein-like 2-like.
    
 0.851
PER2
Putative period circadian protein-like 2-like.
    
 0.851
SMAX5B_014122
Period 3 circadian protein.
    
 0.851
SMAX5B_001490
Period 1.
    
 0.851
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.