STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_012330Uncharacterized protein. (616 aa)    
Predicted Functional Partners:
SMAX5B_014173
mRNA export factor isoform 3.
   
 
  0.663
SMAX5B_013890
Putative nuclear pore complex protein Nup214.
     
 0.657
SMAX5B_007383
Putative nuclear pore complex protein Nup50.
     
 0.585
SMAX5B_019032
NTF2-related export protein 2.
     
 0.535
SMAX5B_014977
Putative nuclear pore membrane glycoprotein 210.
     
 0.529
SMAX5B_005950
Putative nucleoporin NDC1.
   
 
  0.496
SMAX5B_021281
Putative nuclear pore complex protein Nup133.
   
 
 0.469
NUP62
Putative nuclear pore glycoprotein p62 isoform 2.
   
 
 0.455
SMAX5B_001741
Putative nucleoporin p58/p45-like.
   
 
 0.455
SMAX5B_009099
Putative vam6/Vps39-like protein.
      
 0.454
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.