STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_017309Putative attractin-like protein 1. (1329 aa)    
Predicted Functional Partners:
SMAX5B_007806
Putative smoothened-like; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.746
SMAX5B_012115
Putative TBC1 domain family member 31.
    
 0.708
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.708
ENSSMAP00000031987
Platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b.
    
 0.708
SMAX5B_020715
Putative E3 ubiquitin-protein ligase MGRN1.
   
 
 0.648
SMAX5B_008140
Platelet-activating factor acetylhydrolase.
     
 0.554
SMAX5B_000316
Putative membrane-bound O-acyltransferase domain-containing protein 2-like; Belongs to the membrane-bound acyltransferase family.
   
 
  0.546
SMAX5B_017305
Putative RING finger protein 157.
   
 
 0.534
SMAX5B_000356
Putative heat shock 70 kDa protein 4L.
    
  0.504
SMAX5B_019388
Putative heat shock protein 105 kDa.
    
  0.504
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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