STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_012373Putative argininosuccinate lyase. (468 aa)    
Predicted Functional Partners:
ASS1
Argininosuccinate synthase.
 
 0.998
SMAX5B_006068
Putative N-acetylglutamate synthase mitochondrial.
  
 
 0.997
SMAX5B_017462
Ornithine aminotransferase mitochondrial-like; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.996
SMAX5B_018554
Putative ornithine carbamoyltransferase mitochondrial; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
  
 0.974
SMAX5B_006530
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.933
SMAX5B_014772
Citrate synthase; Belongs to the citrate synthase family.
    
 0.932
SMAX5B_014481
Putative agmatinase mitochondrial; Belongs to the arginase family.
    
 0.921
SMAX5B_009005
Arginase.
    
 0.916
ENSSMAP00000021427
Arginase 1.
    
 0.916
SMAX5B_022310
Fumarate hydratase mitochondrial.
  
 
 0.915
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.