STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011956Putative UPF0661 TPR repeat-containing protein C16D10.01c-like isoform 2. (416 aa)    
Predicted Functional Partners:
SMAX5B_010113
60S ribosomal protein L4-B.
  
 
 0.974
ENSSMAP00000003606
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
  
 0.965
SMAX5B_007318
Putative MYCBP-associated protein isoform 2.
  
 0.958
SMAX5B_003992
Phosphoglycerate kinase.
  
 0.958
SMAX5B_011973
Triosephosphate isomerase.
  
 0.946
SMAX5B_003129
Putative guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3-like.
  
 0.946
SMAX5B_012109
Putative glutamate-rich WD repeat-containing protein 1.
   
  
 0.917
SMAX5B_002315
Putative GDH/6PGL endoplasmic bifunctional protein.
  
 
 0.914
SMAX5B_011784
Glyceraldehyde-3-phosphate dehydrogenase.
  
 0.905
SMAX5B_011674
Glyceraldehyde-3-phosphate dehydrogenase.
  
 0.905
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.