STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011929EF-hand domain-containing protein. (469 aa)    
Predicted Functional Partners:
SMAX5B_013085
Putative ubiquitin-like protein 7-like isoform 2.
    
 
 0.527
SMAX5B_005286
Putative RWD domain-containing protein 1-like isoform 2.
      
 0.459
GHITM
Putative growth hormone-inducible transmembrane protein-like; Belongs to the BI1 family.
      
 0.436
SMAX5B_005313
Putative zinc finger with UFM1-specific peptidase domain protein.
      
 0.426
SMAX5B_005728
Putative coiled-coil domain-containing protein 97.
      
 0.414
SMAX5B_022545
Putative clusterin-associated protein 1.
      
 0.414
SMAX5B_006777
Ubiquitin-like domain-containing CTD phosphatase 1.
    
 
 0.412
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.